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Unrecognized option error for java in mac

#UNRECOGNIZED OPTION ERROR FOR JAVA IN MAC CODE#

TNT files did not have the character and state label information written.

NEXUS with protein data sometimes were sometimes written incorrectly.

A bug was introduced into 3.61 that prevented proper processing in many cases, which led to failure to export correct FASTA files for use with tbl2asn for GenBank submission using Chromaseq.

#UNRECOGNIZED OPTION ERROR FOR JAVA IN MAC CODE#

The OTU ID Code database code now correctly processes the path to the database.Export for MrBayes no longer generates two competing "currentPartition" partitions that would cause MrBayes to stop execution.New systems for starting Mesquite on various newer operating systems and newer versions of Java created.Added Terminal Branch Length as a number for taxa.Option to only consider taxon in common when using the Tree Congruent with Specified Tree Topology feature.This is especially useful for genomic datasets with separate alignments, to scroll from locus to locus. You can now scroll from matrix to matrix in the Character Matrix Editor using the Next Matrix and Previous Matrix menu items.These new features and bug fixes are already contained in latest source code in the development branch of the MesquiteProject/MesquiteCore repository on GitHub.

Ī list of new modules in the latest version can be seen by choosing "List new modules" from the Help menuįeatures to come in the next release version of Mesquite are listed on this web page.

If the previous way Mesquite worked could have yielded errors in substantive results (e.g., there was a bug in a phylogenetic calculation), those bugs are marked with. Here are some of the more notable new features and bug fixes since version 1.0. New Features, Bugs, and History of Features and Bug Fixes